Key result
Deep learning on T1 and T2 CMR maps detects acute transplant rejection with ~0.98 AUC.
Why the study?
Endomyocardial biopsy for acute heart transplant rejection is invasive, samples limited myocardium with low interobserver agreement, and may miss early rejection. Non-invasive CMR with quantitative T1 and T2 mapping combined with AI may improve detection, though limited transplant dataset sizes require advanced preprocessing and augmentation for deep-learning training.
Does a deep-learning classification pipeline using quantitative T1 and T2 CMR maps accurately detect acute heart transplant rejection in pediatric and adult heart transplant patients?
Observational (n=57)
Does a deep-learning classification pipeline using quantitative T1 and T2 CMR maps accurately detect acute heart transplant rejection in pediatric and adult heart transplant patients?
A deep-learning model trained on quantitative T1 and T2 CMR maps demonstrated high diagnostic accuracy (AUC 0.977) for detecting acute heart transplant rejection, offering a potential non-invasive alternative to endomyocardial biopsy.
May support non-invasive rejection detection; hypothesis-generating and requires larger prospective validation before practice change.
Background/Introduction Endomyocardial biopsy (EMB) is the current gold standard for detecting acute heart transplant rejection [1]. However, it is invasive, samples only a small myocardial region, shows low interobserver agreement among pathologists in detecting rejection and may miss early-stage acute rejection [2]. Cardiovascular magnetic resonance (CMR) with quantitative T1 and T2 mapping offers non-invasive tissue characterization, and artificial intelligence (AI) may further improve diagnostic performance. Limited dataset sizes in transplant populations require advanced preprocessing and augmentation strategies to enable robust deep-learning (DL) model training. Purpose To develop and evaluate a DL based classification pipeline for detecting heart transplant acute rejection using quantitative T1 and T2 parametric CMR maps. Methods Fifty-seven pediatric and adult heart transplant patients (245 CMR studies; 1–7 scans per patient) were included in the study [3]. The study population was split into training and testing populations with 90/10% share, respectively. The training population consisted of 50 patients and 216 CMR studies, while the testing population consisted of 7 patients and 29 CMR studies. The T1 mapping labeling approach used a hybrid-criteria model: For pediatric studies, cases were labeled as positive if the average T1 value exceeded 1092 ms across 11 heart segments. For adult studies, cases were labeled as positive if the average T1 value was above 1065 ms across 12 heart segments. Native T1 and T2 mapping were performed in three short-axis slices using 1.5T scanners. Parametric T1 and T2 maps were computed using vendor-independent algorithms, followed by segmentation of the left ventricle with a dedicated CNN model. Data coverage was augmented with preprocessing, including scaling, rotation, translation and region of interest masking. Special emphasis was placed on decreasing the effect of patient and vendor specific technical variation. The applied DL model had six inputs, three for each T1 and T2 map in basal, mid, and apical slice locations. Each of the inputs was input to a DenseNET network. The DenseNET layers were interconnected contrast-wise to maximize training power of the convolutional part of the model. The predicted classification label was generated by the final fully connected layer. Finally, performance of the model was assessed using area under the ROC curve (AUC). Results The DL model predicting acute transplant rejection achieved excellent diagnostic performance, with AUC of 0.977. Conclusions A DL model trained on quantitative T1 and T2 CMR maps can reliably detect acute heart transplant rejection. The combination of advanced preprocessing, segmentation, and extensive augmentation enables model training despite limited patient numbers. CMR-based AI support tools have the potential to reduce reliance on invasive EMB and enhance non-invasive rejection monitoring.Fig 1.Applied network model.Fig 2.ROC.
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Peltonen et al. (2026) conducted an observational in Acute heart transplant rejection (n=57). Deep learning classification pipeline using quantitative T1 and T2 parametric CMR maps vs. Hybrid-criteria T1 mapping labeling threshold (>1092 ms in pediatric and >1065 ms in adult studies) was evaluated on Detection of acute heart transplant rejection assessed by area under the ROC curve (AUC) (AUC 0.977). A deep learning model trained on quantitative T1 and T2 CMR maps detected acute heart transplant rejection with an AUC of 0.977.
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