OME2026 Workshop: From OMERO to Galaxy and back: Workflows for Bioimaging

Presentation given at the 19th OME Community Meeting (Düsseldorf, Germany, April 28–30, 2026), organized by German BioImaging (GerBI-GMB). Workshop: From OMERO to Galaxy and Back: Workflows for Bioimaging This workshop provided an overview of image analysis in Galaxy and demonstrated how Galaxy enables FAIR bioimaging workflows and tools, with a focus on the Galaxy OMERO-suite and its integration with OMERO. Topics covered included: An introduction to image analysis in Galaxy: tools, workflows, and use cases for the bioimaging community The Galaxy OMERO-suite: retrieving images and metadata from OMERO into Galaxy, processing them, and uploading images or metadata back to OMERO A live demo of a full round-trip pipeline from OMERO to Galaxy and back. The Galaxy OMERO-suite was developed by Riccardo Massei, who also contributed a hands-on tutorial: https://training.galaxyproject.org/training-material/topics/imaging/tutorials/omero-suite/tutorial.html