Umi-pipeline-nf: A modular and scalable workflow for UMI-tagged nanopore amplicon analysis with real time sequencing integration and GPU-acceleration | Synapse
April 4, 2026Open Access
Umi-pipeline-nf: A modular and scalable workflow for UMI-tagged nanopore amplicon analysis with real time sequencing integration and GPU-acceleration
Key Points
The research aims to develop a scalable workflow for analyzing UMI-tagged nanopore amplicon sequences.
Developed a modular workflow
Integrated real-time sequencing capabilities
Utilized GPU acceleration for data processing
Demonstrated improved analysis efficiency
Achieved faster data processing times
Facilitated real-time sequencing integration
Abstract
Supplementary data are available at Bioinformatics online.