VIPER is a comprehensive solution that performs most standard RNA-seq analyses quickly and effectively with a built-in capacity for customization and expansion.

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VIPER: Visualization Pipeline for RNA-seq, a Snakemake workflow for efficient and complete RNA-seq analysis | Synapse

Cite This Study

Cornwell et al. (Thu,) studied this question.

synapsesocial.com/papers/69dd08dac146d77454e52cec https://doi.org/https://doi.org/10.1186/s12859-018-2139-9

Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

1Moderated estimation of fold change and dispersion for RNA-seq data with DESeq22014 · 99,900 citations
2A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff2012 · 12,620 citations
3Snakemake—a scalable bioinformatics workflow engine2012 · 3,117 citations
4Transcriptome sequencing to detect gene fusions in cancer2009 · 912 citations
5STAR: ultrafast universal RNA-seq aligner2012 · 55,975 citations

Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

1Moderated estimation of fold change and dispersion for RNA-seq data with DESeq22014 · 99,900 citations
2A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff2012 · 12,620 citations
3Snakemake—a scalable bioinformatics workflow engine2012 · 3,117 citations
4Transcriptome sequencing to detect gene fusions in cancer2009 · 912 citations
5STAR: ultrafast universal RNA-seq aligner2012 · 55,975 citations