Structural and functional characterisation of a reconstructed ancestral strigolactone receptor

Strigolactones are phytohormones that regulate shoot branching and promote root interactions with arbuscular mycorrhizal fungi. In seed plants, strigolactone perception begins with the enzyme-receptor DWARF14 (D14), an α/β-hydrolase that is believed to have evolved via gene duplication from the karrikin receptor, KARRIKIN INSENSITIVE2 (KAI2). D14 and KAI2 are highly homologous at the sequence and structural levels, and both proteins bind and cleave similar butenolide compounds. Nevertheless, the two signalling pathways are distinct, as the activity of one receptor cannot compensate for the loss of the other. Here, we apply ancestral sequence reconstruction to generate a D14 protein representative of seed plants to study the evolution of substrate specificity, and to explore desirable traits for protein engineering. We describe the structure, as well as the in vitro and in planta activity of ancestral D14, showing that substrate specificity does not meaningfully differ from that of Arabidopsis thaliana D14. We also demonstrate that ancestral D14 shows higher recombinant yields, greatly increased thermostability, and enhanced catalytic activity relative to D14 from A. thaliana. This work provides insight into the evolution of phytohormone signalling and presents a robust scaffold for the application of D14-type proteins in synthetic biology.