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September 10, 2025

Bioinformatic workflow for Nanopore metabarcoding analysis v1

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The protocol enables the analysis of diverse microbial communities using nanopore sequencing.
It produces essential outputs like rarefaction curves and alpha diversity analysis for ecological insights.
The workflow visualizes the representation of various taxa with stacked bar plots.
Application of this method can enhance understanding of biodiversity within samples.

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Protocol processes nanopore sequencing from a 16S meta-barcoding experiment, showcasing alpha diversity and taxon representation.

Zurita-Artaloitia et al. (2024) studied this question.

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