Abstract Gating is a fundamental and essential process in cytometry data analysis since it defines cell types of interest. Currently, there is no universally accepted method for representing and sharing gating strategies among software, publications, and repositories. I propose using the Prime Population system combined with a modified version of Gödel Numbers to identify any gating strategy uniquely. The Prime Population System is first used to identify gates on bivariate plots; successively, Gödel Numbers are used to set the sequence of the hierarchical gating strategy. The process results are unique identifiers for any existing and future gating strategy. This method represents a further step towards the arithmetization of cytometry metadata.
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Antonio Cosma (2024) studied this question.
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