Inteins are intervening amino acid sequences that are spontaneously removed from proteins during protein splicing. Many interns, such as the intein within the DNA polymerase ll protein, contain a homing endonuclease domain. Homing endonucleases function to cleave molecules of double-stranded DNA. The homing endonucleases we are interested in are within the inteins of the polymerase Ⅱ gene of two thermophiles, Thermococcus barophilus and Thermococcus kodakarensis. The homing endonucleases of these inteins are heat stable, and there is a correlation between higher temperature and increased enzyme activity. DNA cleavage occurs optimally at 50°C for both enzymes, with T. kodakarensis's intein requiring ten-fold less enzyme to reach the same unit of activity. Additionally, we hypothesize that the homing endonuclease within T.kodakanrensis's inteins may have a different response to pressure than that from T. barophilus due to the organism's growth at high pressure. We thank the National Institutes of Health, NIGMS (Grant 1R15GM132817-01) for supporting our research.
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Carter et al. (2024) studied this question.
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