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January 16, 2026Nucleic Acids ResearchOpen Access

A transcriptomic and proteomic map of primary human cell types

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Authors

DMDong-Gi MunAMAnil K. MadugunduSRSantosh Renuse

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Overview

Comprehensive mapping reveals cell type-specific molecular cues, highlighting insights into disease mechanisms.

Key Points

  • The aim is to create a detailed transcriptome and proteome map of various primary human cell types.
  • Analyzed 28 primary human cell types using transcriptomic and proteomic profiling.
  • Identified clusters of epithelial, endothelial, and mesenchymal cell types.
  • Utilized immunohistochemistry to validate specific proteins across human tissues.
  • Conducted extensive protein database searches for post-translational modifications (PTMs).
  • Explored alternative translational start sites and splice junctions for genome annotation.
  • Identified cell type-enriched molecules such as GRAP and C1orf116.
  • Discovered novel PTMs, including serine O-acetylation and histidine methylation.
  • Observed higher frequency of dioxidation on tryptophan than on methionine.
  • Detected peptides supporting translational readthrough for proteins like LDHB and MDH1.
  • Revealed significant molecular heterogeneity among primary human cell types.

Cite This Study

Mun et al. (2025) studied this question.

synapsesocial.com/papers/6969d518940543b97770a0bdhttps://doi.org/10.1093/nar/gkaf1498
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