Atomistic simulations uncover lipid-protein interactions and conformational landscapes in membrane proteins, indicating critical coupling mechanisms.
The understanding of the interplay between the lipid properties of the membrane and the protein conformational landscape is key to explaining the function of membrane proteins. Experimentally, high-pressure NMR on lipid nanodiscs has been recently proposed as a method to probe the allosteric communication between the lipid bilayer and the bacterial model membrane protein OmpX. [1] Here, I will present our recent atomistic molecular dynamics (MD) simulations on periodic bilayer models, carried out in close collaboration with experimental groups, [2] which provide unprecedented insight into the molecular details of lipid-protein interactions. Remarkably, state-of-the-art lipid force fields quantitatively capture the membrane phase transition under increasing pressure. The presence of a membrane protein such as OmpX shifts this transition to higher pressures, in agreement with experimental observations. Simulations reveal that OmpX delays gelation by liquefying the annular shell of lipids in its first solvation layers. We further compare infinite bilayer systems (proxies for liposomes) with lipid nanodiscs commonly used in experiments, highlighting the impact of the scaffold protein on the pressure response of both lipids and membrane proteins. I will present preliminary results on a G-protein-coupled receptor, which displays a more complex conformational landscape than OmpX. [1] Pozza, A. et al. (2022). Nat. Commun. , 13, 1780. [2] Fourel, C., Gautier, Y., Pozza, A., Giraud, F., Le Bon, C., Moncoq, K., Stirnemann, G., Hénin, J., Lescop, E., and Catoire, L. J. (2025). Biophys. J. , 124(16), 2613–2626
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