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March 26, 2026BMC Plant BiologyOpen Access

Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection

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Authors

MCMiguel Rufo CamposUniversidad de ZaragozaJVJohn P. VogelEPErnesto Pérez-CollazosUniversidad de Zaragoza

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Implication

Comparative genomics illuminates plastome diversity and evolutionary dynamics in annual Brachypodium species, highlighting complexities in adaptation.

Key Points

  • To investigate the evolution of plastomes in annual Brachypodium species, focusing on their diversity and adaptive changes.
  • Analyzed 287 plastomes from B. distachyon, B. stacei, and B. hybridum.
  • Explored structural variations, selection patterns, and phylogenomic relationships.
  • Utilized Tajima’s neutrality test and evolutionary models to detect positive selection in plastid genes.
  • Confirmed differentiation of S and D plastomes inherited from B. stacei and B. distachyon.
  • Identified high SNP diversity in B. hybridum-D plastotypes and low diversity in B. hybridum-S.
  • Detected positive selection in 29 plastid genes, with notable genes including matK and ndhF.

Cite This Study

Campos et al. (2026) studied this question.

synapsesocial.com/papers/69c4cd3efdc3bde448919539https://doi.org/10.1186/s12870-026-08570-2
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