Knowledge-Guided Multi-Source Time-Series Approach for Spatially Robust Crop Type Classification

Accurate crop classification in complex and heterogeneous agricultural landscapes is often challenged by mixed-pixel effects and spatial autocorrelation. This study proposes a prior-guided crop classification framework that integrates accessible Moderate Resolution Imaging Spectroradiometer (MODIS) optical and Sentinel-1 synthetic aperture radar (SAR) time-series data with explicit phenological and structural priors. By embedding physically meaningful constraints into temporal feature learning, the model shifts from purely data-driven learning toward biophysically interpretable discrimination between crop types and background classes. Performance was rigorously evaluated using spatial cross-validation (SCV) to ensure geographic independence. Results demonstrate that the prior-guided CNN achieves an overall accuracy (OA) of 98.66% and a Kappa of 0.9832, outperforming unguided deep learning and conventional machine learning models. Notably, the framework exhibits high spatial robustness, with a minimal performance gap between random and spatial validation (ΔOA = 0.0049). In addition to improving classification accuracy, integrating phenological features with SAR-based prior information enhances the stability of non-crop categories in fragmented scenarios, while leveraging readily available medium-resolution data to support large-scale applications. These findings demonstrate that embedding physically meaningful prior knowledge into multi-source time-series learning improves classification accuracy while enhancing spatial generalizability and interpretability. More broadly, the proposed framework offers a transferable paradigm for integrating domain knowledge with deep learning, providing a practical and scalable solution for crop mapping in heterogeneous agricultural landscapes using widely accessible medium-resolution data.