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June 20, 2025DiversityOpen Access

Genetic Diversity of Selective Breeding Populations of Giant Freshwater Prawn (Macrobrachium rosenbergii) Based on SSR and Mitochondrial D-Loop Gene

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Authors

SISalifu IbrahimARAmin RuhulLJLI Jing-fen

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Overview

Genetic analysis reveals moderate to high genetic diversity across six breeding populations of giant freshwater prawns, suggesting strong potential for future selective breeding programs.

Key Points

  • Evaluate the genetic diversity and population structure across six selective breeding stocks of giant freshwater prawn (Macrobrachium rosenbergii) to inform broodstock management.
  • Evaluated six selective breeding populations in China (HF, NTH, JX, SF, TW, and GX) using 16 newly developed microsatellite markers.
  • Sequenced the mitochondrial control region (D-loop) to assess genetic differentiation and diversity metrics across populations.
  • Microsatellite markers showed polymorphism information content (PIC) > 0.5 across all loci, with expected heterozygosity ranging from 0.83 (GX) to 0.89 (SF) and pairwise Fst values from 0.03541 to 0.09637 (p < 0.05).
  • Mitochondrial D-loop analysis identified 114 variable sites and 29 haplotypes, yielding a mean haplotype diversity of 0.640, nucleotide diversity of 0.01247, and pairwise Fst values of 0.05603–0.80788 (p < 0.05).

Cite This Study

Ibrahim et al. (2025) studied this question.

synapsesocial.com/papers/6a006b84ef8139f8ff7792aehttps://doi.org/10.3390/d17070437
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Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Genetic Diversity Analysis of 11 Macrobrachium rosenbergii Germplasms Based on Microsatellite Markers2026
  2. 2Morphological Diversity of Different Male Morphotypes of Giant Freshwater Prawn Macrobrachium rosenbergii (De Man, 1879)2023 · 22 citations
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  4. 4Integration of Gut Microbiota with Transcriptomic and Metabolomic Profiling Reveals Growth Differences in Male Giant River Prawns (Macrobrachium rosenbergii)2024 · 3 citations
  5. 5Interaction of host gene-gut microbiota in male grading of <i>Macrobrachium rosenbergii</i>2025