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October 20, 2010BMC Medical Research MethodologyOpen Access

Polytomous diagnosis of ovarian tumors as benign, borderline, primary invasive or metastatic: development and validation of standard and kernel-based risk prediction models

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Authors

BCBen Van CalsterRega Institute for Medical ResearchLVL. ValentinSkåne University HospitalCHCaroline Van HolsbekeAZ Sint-Jan

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Implication

Multi-center validation study reveals effective multi-class ovarian tumor risk prediction in ultrasound patients, highlighting the utility of paired logistic regression.

Key Points

  • To develop and validate polytomous risk prediction models classifying ovarian tumors into benign, borderline, primary invasive, or metastatic categories using standard and kernel-based algorithms.
  • Trained diagnostic models using a multicenter development dataset (N=1,066) and tested generalizability on a separate multicenter temporal and external validation dataset (N=1,938).
  • Compared standard logistic regression against penalized kernel-based algorithms (least squares support vector machines and kernel logistic regression) utilizing true polytomous structures and pairwise coupling.
  • Conducted variable selection using cross-validated c-indexes and evaluated performance via polytomous and dichotomous c-indexes alongside calibration graphs.
  • Internal validation achieved polytomous c-indexes between 0.64 and 0.69, with the optimal model yielding dichotomous c-indexes ranging from 0.73 (primary invasive vs metastatic) to 0.96 (borderline vs metastatic).
  • External and temporal validation demonstrated polytomous c-indexes between 0.57 and 0.64, though discrimination between primary and metastatic invasive tumors decreased to near random levels.
  • Pairwise coupling of dichotomous standard logistic regression models utilizing 9 to 11 predictors performed comparably to advanced kernel-based algorithms.

Cite This Study

Calster et al. (2010) studied this question.

synapsesocial.com/papers/6a00c07f581c6e761e77d7behttps://doi.org/10.1186/1471-2288-10-96
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