What question did this study set out to answer?

To introduce the Department of Energy Joint Genome Institute Genome Portal and describe its centralized architecture for distributing and analyzing large-scale environmental and bioenergy genomic data.

November 22, 2011Nucleic Acids ResearchOpen Access

The Genome Portal of the Department of Energy Joint Genome Institute

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Authors

IGIgor V. GrigorievKanazawa University HNHenrik NordbergUniversity of Bergen ISIgor ShabalovLawrence Berkeley National Laboratory

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Implication

Platform report presents unified access to large-scale sequencing and comparative analysis tools, highlighting specialized resources like MycoCosm for fungal genomics.

Key Points

To introduce the Department of Energy Joint Genome Institute Genome Portal and describe its centralized architecture for distributing and analyzing large-scale environmental and bioenergy genomic data.
Engineered centralized data management systems and specialized analytical web tools to handle tens of trillions of DNA bases generated annually.
Developed organism-specific comparative genomics frameworks tailored to plants, microbes, metagenomes, and fungi.
Created a unified public web portal allowing researchers to track project progress, retrieve genomic assemblies, and inspect gene annotations.
Integrated MycoCosm, an interactive resource specifically designed to navigate, compare, and analyze fungal genomic datasets.

Cite This Study

Grigoriev et al. (2011) studied this question.

synapsesocial.com/papers/6a129f12e407b26696354980 https://doi.org/10.1093/nar/gkr947

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Implication

Platform report presents unified access to large-scale sequencing and comparative analysis tools, highlighting specialized resources like MycoCosm for fungal genomics.

The Genome Portal of the Department of Energy Joint Genome Institute

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Member takes

Implication

Key Points

Cite This Study

The Genome Portal of the Department of Energy Joint Genome Institute

Discussion

Member takes

Implication

Key Points

Cite This Study

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