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March 1, 1990Proceedings of the National Academy of SciencesOpen Access

Substrate sequence effects on "hammerhead" RNA catalytic efficiency.

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Population

"hammerhead" RNA self-cleaving domain assembled from two RNA molecules

Design

Preclinical

Authors

MFMartha J. FedorScripps Research InstituteOUOlke C. UhlenbeckNorthwestern University

Discussion

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Implication

Substrate structure may dictate hammerhead efficiency in vitro; leaves open relevance to therapeutic ribozyme applications.

Structured PICO

P
Population
"hammerhead" RNA self-cleaving domain assembled from two RNA molecules (large ribozyme RNA and small substrate RNA)
I
Intervention
Four hammerheads with identical catalytic core sequences but differing base composition of helices involved in substrate binding
O
Outcome
Cleavage rates (kcat and Km values)surrogate

The secondary structure of substrate RNA can be a major determinant of hammerhead catalytic efficiency, as substrates with high Km values form nonreactive aggregates.

Cite This Study

Fedor et al. (1990) studied this question.

synapsesocial.com/papers/6a1bef25ea84844e355f314ehttps://doi.org/10.1073/pnas.87.5.1668
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