Landscape-Derived Indicators of Water-Related Ecological Risks: Multi-Scale Drivers and Zoned Governance in Yangtze River Basin Urban Agglomerations

Climate change and rapid urbanization increasingly threaten water security in large river basins, yet existing assessments often fail to capture the multi-scale interactions between hydroclimatic extremes and human activities. To address this gap, we developed an integrated framework combining risk assessment, multi-method driver diagnosis (Geodetector, Multi-Scale Geographically Weighted Regression (MGWR), and Structural Equation Modeling (SEM)), and Zoned Management. Using a landscape-derived Ecological Risk Index (ERI) as a proxy indicator of runoff and non-point source potential, based on established empirical linkages between landscape metrics and hydrological processes, we applied the framework to three major urban agglomerations in the Yangtze River Basin from 2000 to 2020. Our results reveal three distinct risk mechanisms: in the Chengdu–Chongqing area (CYUA), a 165.8% increase in impervious surfaces drives altered runoff; in the Middle Reaches (MRC), the q-value of the Standardized Precipitation Index (SPI) rose from 0.017 in 2000 to 0.146 in 2020, corresponding to a 759% relative increase. Although the absolute q-value of SPI remains moderate at around 0.15, its rapid rise suggests increasing hydrological sensitivity of the MRC’s river–lake system to precipitation extremes; in the Yangtze River Delta (YRD), socioeconomic activities exert overriding pressure. Based on these diagnostics, we propose tailored strategies for water environment management, adaptive planning, and disaster mitigation. This framework offers a scientific basis for differentiated water governance in large river basins facing coupled anthropogenic and hydroclimatic pressures.