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June 14, 2026International Journal of Neural Systems

Latent Space Projections and Atlases, a Cautionary Tale in Deep Neuroimaging using Autoencoders

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Authors

JGJ.M. GorrizFSF SegoviaCJC. Jimenez-Mesa

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Overview

Randomized trial investigates latent representations in brain MRI, indicating importance in Alzheimer’s research.

Key Points

  • The research aims to explore latent representations in brain MRI using a convolutional autoencoder to understand clinical variability in Alzheimer’s disease.
  • Developed a convolutional autoencoder with a hierarchical encoder and compact latent space.
  • Applied dimensionality reduction techniques like PCA, t-SNE, PLS, and UMAP for visualization.
  • Introduced the Latent–Regional Correlation Profiling (LRCP) framework to identify clinically relevant brain regions.
  • Minimal architectures captured meaningful progression patterns to Alzheimer's disease.
  • Validation through SHAP-based regression predicted reconstruction error from gray matter intensities.
  • Statistical agnostic methods confirmed the results, emphasizing rigorous evaluation in neuroimaging.

Cite This Study

Gorriz et al. (2026) studied this question.

synapsesocial.com/papers/6a2e4753b1cc60ccdea8be9bhttps://doi.org/10.1142/s012906572650053x
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