Key result
Microarray analysis identified 25 differentially expressed genes, with APOE, MFGE8, ALB, APOB, SAA1, A2M, and C3 identified as key hub genes associated with stress cardiomyopathy.
Why the study?
Stress cardiomyopathy symptoms resemble acute coronary syndrome, but little is known about its biomarkers.
BACKGROUND: Stress cardiomyopathy (SCM) is a transient reversible left ventricular dysfunction that more often occurs in women. Symptoms of SCM patients are similar to those of acute coronary syndrome (ACS), but little is known about biomarkers. The goals of this study were to identify the potentially crucial genes and pathways associated with SCM. METHODS: We analyzed microarray datasets GSE95368 derived from the Gene Expression Omnibus (GEO) database. Firstly, identify the differentially expressed genes (DEGs) between SCM patients in normal patients. Then, the DEGs were used for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Finally, the protein-protein interaction (PPI) network was constructed and Cytoscape was used to find the key genes. RESULTS: In total, 25 DEGs were identified, including 10 upregulated genes and 15 downregulated genes. These DEGs were mainly enriched in ECM-receptor interaction, dilated cardiomyopathy (DCM), human papillomavirus infection, and focal adhesion, whereas in GO function classification, they were mainly enriched in the extracellular region, positive regulation of the multicellular organismal process, establishment of localization, and intracellular vesicle. CONCLUSION: Seven hub genes contained APOE, MFGE8, ALB, APOB, SAA1, A2M, and C3 identified as hub genes of SCM, which might be used as diagnostic biomarkers or molecular targets for the treatment of SCM.
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Pan et al. (2020) studied Stress cardiomyopathy (SCM). Stress cardiomyopathy vs. Normal patients was evaluated on Differentially expressed genes (DEGs) and hub genes. Microarray analysis identified 25 differentially expressed genes, with APOE, MFGE8, ALB, APOB, SAA1, A2M, and C3 identified as key hub genes associated with stress cardiomyopathy.
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