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September 22, 2023Frontiers in Veterinary ScienceOpen Access

Transcriptome profiling of the four stomach compartments in yaks revealed distinct spatiotemporal mRNA expression patterns during the transition from pre-ruminant to ruminant.

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Why the study?

The development of the four stomachs of yak is closely related to health and performance, but the underlying molecular mechanisms are largely unknown.

Population

Yaks across five growth time points [0 day, 20 days, 60 days, 15 months and 3 years (adult)]

Comparison

mRNA expression across rumen, reticulum, omasum, and abomasum across 5 developmental stages

Design

Transcriptome profiling study

Key result

Transcriptome profiling of the four stomach compartments in yaks revealed distinct spatiotemporal mRNA expression patterns during the transition from pre-ruminant to ruminant.

Authors

YLYili LiuQMQi MinJTJiao Tang

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Overview

Hypothesis-generating for yak rumen ontogeny; extends transcriptomic mapping of ruminant transition but requires validation before application.

PICO

P
Population
15 healthy Maiwa yaks across five developmental stages (0 days to 3 years) were studied to analyze transcriptome profiling in their four stomach compartments.
E
Exposure / Comparator
Developmental stage (age) vs 0 days of age (baseline)
O
Primary Outcome
Differentially expressed mRNAs (DEmRNAs) and gene co-expression networks across developmental stages

Limitations

  • Small sample size of 3 yaks per developmental stage group
  • Lack of functional in vivo validation of the identified hub genes

Cite This Study

Liu et al. (2023) studied Healthy yaks (developmental transition) (n=15). Developmental stage (age) vs. 0 days of age (baseline) was evaluated on Differentially expressed mRNAs (DEmRNAs) and gene co-expression networks across developmental stages. Transcriptome profiling of the four stomach compartments in yaks revealed distinct spatiotemporal mRNA expression patterns during the transition from pre-ruminant to ruminant.

synapsesocial.com/papers/6a957f55c163d75667fa91c3https://doi.org/10.3389/fvets.2023.1204706
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Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Microbial Metagenomes and Host Transcriptomes Reveal the Dynamic Changes of Rumen Gene Expression, Microbial Colonization and Co-Regulation of Mineral Element Metabolism in Yaks from Birth to Adulthood2024 · 2 citations
  2. 2RNA-Seq Reveals Gastrointestinal Transcriptome Dynamics in Preweaning Yak Calves Fed Concentrate Supplements2026
  3. 3Multi-Species Transcriptomics of the Mammalian Stomach Reveals Conserved Programs and Ruminant Chamber Specialization2026
  4. 4Proteomics Reveals the Obstruction of Cellular ATP Synthesis in the Ruminal Epithelium of Growth-Retarded Yaks2024 · 9 citations
  5. 5The transcriptome construction and microbial succession pattern in the intestinal tract of 3–5 month-old yak calves2026