Key result
Molecular dynamics simulations reveal greater Angiotensin II N-terminus flexibility in water versus DMSO.
Molecular dynamics simulations reveal structural features of Angiotensin II that may aid in the rational design of novel AT1 receptor antagonists.
Does not inform clinical AT1 antagonist use; leaves open whether these MD-derived conformations can guide future antagonist design.
Angiotensin II (Ang II) is an octapeptidic hormone, which plays an important role in the mechanisms of blood pressure control. In this work, extensive molecular dynamics (MD) simulations have been carried out on this peptide, both in aqueous and in dimethyl sulfoxide (DMSO) environments. Experimentally proposed models for the structure of angiotensin II in both environments are not consensual and the results obtained have provided some further insight about the structural properties of this hormone. In these simulations, the N-terminus of Ang II in the aqueous environment has been associated with a considerable larger flexibility than the correspondent C-terminus, but this was not found in the case of the DMSO environment. This is consistent with the assumption that the biological activity of Ang II is associated with its C-terminal residues embedded in a hydrophobic environment of its AT1 receptor. Other features detected in DMSO environment were an H(His6 imidazole)-O(Phe8 carboxylate) hydrogen bond and a salt-bridge structure involving the Asp1 and Arg2 side chains. An additional important conformational feature is the spatial proximity between Tyr4 and His6 in both water and DMSO environments. This molecular feature may trigger the interest for the synthetic chemists to apply rational design for the synthesis of novel AT1 antagonists.
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Preto et al. (2005) studied this question. Molecular dynamics simulations in aqueous and dimethyl sulfoxide (DMSO) environments was evaluated on Structural properties and flexibility of Angiotensin II. Molecular dynamics simulations revealed greater N-terminus flexibility of Angiotensin II in water versus DMSO, and identified spatial proximity between Tyr4 and His6 in both environments.
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