Key result
Data-extracted gating models accurately predict held-out protocols, capturing ~96% of drug-screening traces without global fitting.
Why the study?
Standard global fitting of Markov schemes to voltage-clamp data for cardiac ion-channel models yields non-identifiable parameters, limiting predictive accuracy.
A novel data-extracted modeling approach for cardiac ion channels yields parameter-efficient models that accurately predict drug-screening traces while avoiding the non-identifiability issues of standard global fitting.
May improve identifiability of cardiac ion-channel models for CiPA screening; leaves open experimental validation before broader adoption.
Cardiac ion-channel models underpin in silico drug-safety assessment, yet the standard route, global fitting of Markov schemes to voltage-clamp data, yields non-identifiable parameters. Here we invert the workflow: for four cardiac channels (hERG/I_Kr, Na_v1.5/I_Na, Ca_v1.2/I_CaL, KCNQ1+KCNE1/I_Ks) we extract gating time constants, steady-state availability and delays from public voltage-clamp data as voltage-dependent tables, test each for constancy, and assemble models with one free per-cell conductance and, where data demand it, one midpoint shift. Time-constant tables prove portable across cells (CV 0.13--0.19, hERG deactivation; 0.029, Na_v1.5 inactivation at threshold); voltage midpoints do not. The pattern repeats in all four channels and in an independent five-temperature programme (670 wells). Without global fitting, the models forward-predict held-out protocols, including action-potential clamp and 65 of 68 CiPA drug-screening traces. A Fisher-information analysis of a 13-parameter Markov model shows the data identify only modal coordinates (six null directions; condition number 7.4 x 10^12). Across the tested drug panels, in all four channels drugs reject pure pore block and modulate steady-state occupancy and inactivation tables, not kinetics. A fifth channel (K_v4.3) reproduces all published anchors; a candidate condition-dependent inactivation-timescale shift is registered. Every governing quantity is either measured directly or an explicitly registered assumption; cell-to-cell variability is localised, not averaged away.
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Huan Li (2026) studied Cardiac ion-channel modeling. Data-extracted gating kinetics modeling vs. Standard global fitting of Markov schemes was evaluated on Forward-prediction of held-out protocols. Data-extracted gating kinetics models successfully forward-predicted held-out protocols, including action-potential clamp and 65 of 68 CiPA drug-screening traces, without requiring global fitting.
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