Genome-referenced culture-supernatant proteomic data sets from a marine microbial community exposed to amorphous and semi-crystalline polyhydroxyalkanoates

We report liquid chromatography–tandem mass spectrometry data sets of culture-supernatant proteins from a natural seawater microbial community exposed to amorphous or semi-crystalline polyhydroxyalkanoates. Protein identification used 3,291 proteins predicted from the publicly available genome of Alcanivorax sp. strain PHAMB4001, linking the proteomic resource to a defined genomic reference.