July 31, 2025Wellcome Open Research0 citationsOpen Access

The genome sequence of the crucian carp, Carassius carassius (Linnaeus, 1758) (Cypriniformes: Cyprinidae)

Key Points

The genome sequence of Carassius carassius spans 1,684.30 megabases, contributing to our understanding of fish genomics.
98.41% of the sequence is organized into 50 chromosomal pseudomolecules, providing insight into chromosomal structure.
The mitochondrial genome is fully assembled, measuring 16.6 kilobases, highlighting its significance in genetic research.
Gene annotation indicates the presence of 39,044 protein-coding genes, which could inform future studies on gene function and evolution.

Abstract

We present a genome assembly from a juvenile female Carassius carassius (crucian carp; Chordata; Actinopteri; Cypriniformes; Cyprinidae). The genome sequence has a total length of 1 684.30 megabases. Most of the assembly (98.41%) is scaffolded into 50 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 16.6 kilobases. Gene annotation of this assembly on Ensembl identified 39 044 protein-coding genes.

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Hänfling et al. (Wed,) studied this question.

synapsesocial.com/papers/689a094be6551bb0af8cf2f8 https://doi.org/https://doi.org/10.12688/wellcomeopenres.24682.1

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