Genome assembly uncovers repetitive elements and adaptive evolution traits in Schizodactylus jimo from China, demonstrating its unique adaptations.
The Schizodactylidae family, an ancient lineage within Orthoptera, is ideal for studying adaptive evolution due to its sand-dwelling habits and unique tarsi, but genomic data scarcity has hindered research. To fill this knowledge gap, this study presents the first chromosome-level genome assembly and annotation for Schizodactylus jimo, a species endemic to China known for its unique adaptations to sandy environments. Using a combination of PacBio HiFi long-read sequencing and Hi-C scaffolding technologies, we constructed a high-quality reference genome. The final assembly spans 1.192 Gb with an impressive scaffold N50 of 198.77 Mb. A total of 94.65% of the sequence was successfully anchored into 9 pseudochromosomes. The genome's integrity was confirmed by a 98.0% BUSCO completeness score. Annotation identified that 40.51% of the genome consists of repetitive elements and predicted a total of 14,215 protein-coding genes. Of these genes, 12,747 (accounting for 89.67%) have had their functions annotated in different databases.
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Binbin et al. (2025) studied this question.
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