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Describe recent updates to the Encyclopedia of DNA Elements (ENCODE) data portal aimed at enhancing the findability, accessibility, interoperability, and reusability of functional genomic data.

October 25, 2019Nucleic Acids ResearchOpen Access

New developments on the Encyclopedia of DNA Elements (ENCODE) data portal

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Describe recent updates to the Encyclopedia of DNA Elements (ENCODE) data portal aimed at enhancing the findability, accessibility, interoperability, and reusability of functional genomic data.
Upgraded the central web portal maintained by the ENCODE Data Coordinating Center to support new functional genomics data and assay types.
Implemented standardized data processing pipelines, visualization tools, a dataset cart utility, and open public cloud hosting via the Amazon Web Services registry.
Expanded access to human and mouse genomic datasets accompanied by uniform processing pipelines and improved technical documentation.
Established unrestricted cloud-based repository hosting to facilitate high-throughput reanalysis and download of massive functional genomics datasets.

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Resource report demonstrates upgraded data pipelines and cloud access in human and mouse genomic databases, highlighting enhanced findability and reuse.

Cite This Study

Luo et al. (2019) studied this question.

synapsesocial.com/papers/69dce181d111c0385b359762 https://doi.org/10.1093/nar/gkz1062

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Implication

Resource report demonstrates upgraded data pipelines and cloud access in human and mouse genomic databases, highlighting enhanced findability and reuse.

New developments on the Encyclopedia of DNA Elements (ENCODE) data portal

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Implication

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New developments on the Encyclopedia of DNA Elements (ENCODE) data portal

Key Points

Discussion

Implication

Cite This Study

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