What question did this study set out to answer?

To present CaeNDR, an expanded community genomics platform enabling quantitative genetics and natural variation research across three Caenorhabditis species.

October 19, 2023Nucleic Acids ResearchOpen Access

CaeNDR, the Caenorhabditis Natural Diversity Resource

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To present CaeNDR, an expanded community genomics platform enabling quantitative genetics and natural variation research across three Caenorhabditis species.
Expanded the original CeNDR platform to incorporate three distinct nematode species: C. elegans, C. briggsae, and C. tropicalis.
Integrated wild strain repositories, whole-genome sequencing archives, and annotated variant datasets into a centralized web architecture.
Developed interactive online tools and automated workflows for genome-wide association (GWA) mapping.
Established an updated, open-access repository hosting continuously updated wild strain collections and annotated variant data at caendr.org.
Enabled community-wide quantitative genetic analysis and interactive GWA mapping across multiple Caenorhabditis species.

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Implication

Bioinformatics resource demonstrates integrated genomic variant mapping across three Caenorhabditis nematode species, highlighting expanded tools for natural diversity research.

Cite This Study

Crombie et al. (2023) studied this question.

synapsesocial.com/papers/6a1997fb7081f56b37decd98 https://doi.org/10.1093/nar/gkad887

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Implication

Bioinformatics resource demonstrates integrated genomic variant mapping across three Caenorhabditis nematode species, highlighting expanded tools for natural diversity research.

CaeNDR, the Caenorhabditis Natural Diversity Resource

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CaeNDR, the Caenorhabditis Natural Diversity Resource

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Implication

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