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August 24, 2026Scientific ReportsOpen Access

Identify and validate the genes linked to mitochondrial quality control in colorectal cancer

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Authors

HFHao FuCCChanghua ChiWNWenhan Nie

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Overview

Bioinformatic and experimental analysis reveals a seven-gene mitochondrial quality control signature in colorectal cancer, highlighting altered immune infiltration and therapeutic targets.

Key Points

  • To identify and validate prognostic genes linked to mitochondrial quality control in colorectal cancer and characterize their immune and therapeutic associations.
  • Calculated mitochondrial quality control scores in public colorectal cancer datasets using single-sample gene set enrichment analysis (ssGSEA) and identified co-expressed genes via WGCNA.
  • Constructed a prognostic risk signature using differential expression, univariate Cox regression, and LASSO regression, followed by immune profiling, drug sensitivity predictions, and RT-qPCR validation.
  • Identified a seven-gene prognostic signature (GIMAP1, SIGLEC1, FCGR2B, C1orf162, VSIG4, P2RY13, SLAMF1) that stratified patient survival, though adding it to clinical factors did not improve discrimination (C-index: 0.785 vs. 0.789; ΔC-index = −0.004).
  • High-risk tumors showed significant enrichment in focal adhesion pathways, marked differences across 20 immune cell types, positive correlation with regulatory T cells (p < 0.001), and heightened predicted sensitivity to Trk kinase and IGF1R inhibitors.
  • RT-qPCR analysis confirmed significant down-regulation of GIMAP1, FCGR2B, and VSIG4 in colorectal cancer tissue samples.

Cite This Study

Fu et al. (2026) studied this question.

synapsesocial.com/papers/6a8c005bbca056c88e6df086https://doi.org/10.1038/s41598-026-67601-y
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