An upper-division undergraduate laboratory experiment is described that explores the structure/function relationship of protein domains, namely leucine zippers, through a molecular graphics computer program and physical models fabricated by 3D printing. By generating solvent accessible surfaces and color-coding hydrophobic, basic, and acidic amino acid residues, students are able to visualize noncovalent interactions that are important in protein folding and protein–protein interactions.
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Scott C. Meyer (2015) studied this question.
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