Key result
Multiply substituted FMDV G-H loop peptide binds antibody 4C4 like unsubstituted counterpart, stabilized by water.
Why the study?
The constancy of the structure of an antigenic domain despite multiple amino acid substitutions has implications for vaccine design.
Population
15 amino acid synthetic peptide from FMDV subtype C(1)
Comparison
Multiply substituted peptide vs unsubstituted synthetic peptide antigen
Design
Structural study with molecular-dynamic simulations
Authors
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Supports FMDV vaccine design via water-stabilized epitopes; leaves open broader applicability pending further validation.
The constancy of the structure of an antigenic domain despite multiple amino acid substitutions, facilitated by water molecules, has implications for vaccine design.
Ochoa et al. (2000) studied Foot-and-mouth disease virus (FMDV). 15 amino acid synthetic peptide (G-H loop of VP1) complexed with Fab fragment of monoclonal antibody 4C4 vs. Unsubstituted synthetic peptide antigen was evaluated on Crystal structure at 2.3 A resolution and molecular-dynamic simulations. The multiply substituted G-H loop peptide from FMDV binds the neutralizing antibody 4C4 with a conformation similar to its unsubstituted counterpart, stabilized by a key water molecule.
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