Companion repository for the manuscript on healthcare occupancy as an early warning signal for infectious disease surges. Contains hourly occupancy data for 17 public urgent care units in the São Paulo metropolitan area, collected from 5 July 2023 to 8 October 2024 and analysed over the epidemiological weeks from 15 July 2023 to 12 October 2024, weekly laboratory surveillance series for SARS-CoV-2, dengue and respiratory viruses, and the Python pipeline behind the supplementary data files and the source series for the manuscript figures: dynamic time warping, Granger causality testing, a z-based epidemic volatility index, early warning lead time analysis, and LISA spatial association analysis.
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Araújo et al. (2026) studied this question.
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