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September 23, 2026Communications MedicineOpen Access

Challenges of clustering disease trajectories in people with multiple long-term conditions using data from 7.2 million patients

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Key result

Data-driven disease trajectory clusters predict ED attendance and hospitalization worse than simple condition counts.

  • n=7,285,210

Why the study?

Generating clusters of people with similar patterns of multiple long-term conditions could help target healthcare services, but clinical interpretability and outcome associations remain unclear.

Do data-driven clusters of disease trajectories accurately predict 1-year health outcomes compared to simple counts of long-term conditions in adults?

Comparison

Data-driven clustering of disease trajectories vs no long-term conditions and prediction using count of conditions, individual diseases, or embeddings

Design

Cohort study using transformer model embeddings and k-means clustering

Follow-up

1 year

Authors

TBThomas BeaneyJCJonathan ClarkeTWThomas Woodcock

Discussion

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Member takes

Overview

Clusters add little predictive value beyond condition counts; challenges data-driven trajectory clustering for short-term multimorbidity outcomes.

Key Points

  • To generate data-driven clusters of patients based on their disease trajectories and evaluate their clinical interpretability and association with subsequent health outcomes.
  • Population-based cohort study of 7,285,210 adults (5,981,091 with multiple long-term conditions and 1,304,119 without chronic conditions) using CPRD Aurum linked to hospital records as of January 1, 2015.
  • Disease trajectories were transformed into vector embeddings using a transformer model and grouped into trajectory clusters using k-means clustering.
  • Participants were followed for 1 year to evaluate cluster associations with emergency department attendance, hospital admissions, and mortality compared with individual diseases, raw embeddings, and condition counts.
  • The model identified eight optimal clusters of patients with multiple long-term conditions, with the largest representing 21.3% of the population dominated by cardio-kidney-metabolic conditions, though dominant conditions heavily overlapped between clusters.
  • Trajectory clusters explained only 1.2% to 3.1% of the total variance in 1-year outcomes, and initial differences in odds of emergency attendance, hospitalization, and death substantially attenuated after adjusting for age, sex, ethnicity, and deprivation.
  • Clusters performed substantially worse at predicting outcomes than individual diseases or raw embeddings, and performed worse than a simple count of long-term conditions for predicting emergency department visits and hospital admissions.

Study Design

Type

Cohort (n=7,285,210)

Structured PICO

Do data-driven clusters of disease trajectories accurately predict 1-year health outcomes compared to simple counts of long-term conditions in adults?

P
Population
7,285,210 adults, including 5,981,091 with multiple long-term conditions and 1,304,119 without chronic conditions, followed for 1 year.
E
Exposure
Data-driven clustering of disease trajectories using a transformer model followed by k-means clustering.
C
Comparator
Patients with no long-term conditions, or prediction using simple count of long-term conditions, individual diseases, or embeddings alone.
O
Outcome
1-year emergency department (ED) attendance, hospitalisation, and mortality.hard clinical

Data-driven clustering of multiple long-term condition trajectories explains little variation in 1-year health outcomes and performs worse than simple condition counts for predicting healthcare utilization.

Limitations

  • Interpretation of the clusters was challenging due to overlap of the dominant conditions across clusters
  • Clusters explained little of the variation in 1-year health outcomes

Cite This Study

Beaney et al. (2026) conducted a cohort in Multiple Long-Term Conditions (MLTC) (n=7,285,210). Cluster membership based on disease trajectories vs. Patients with no long-term conditions was evaluated on ED attendance, hospitalisation and mortality. Data-driven clusters of disease trajectories explained only 1.2-3.1% of variance in 1-year outcomes and performed worse than simple condition counts at predicting ED attendance and hospitalisation.

synapsesocial.com/papers/6ab39db54f6cc12e38b51328https://doi.org/10.1038/s43856-026-01917-8
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Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

  1. 1Association of latent class analysis-derived multimorbidity clusters with adverse health outcomes in patients with multiple long-term conditions: comparative results across three UK cohorts2024 · 14 citations
  2. 2Clustering by health and social care need in multple long-term conditions (MLTC): an exploratory qualitative study to understand the views of professionals and people living with MLTC about future interventions2024
  3. 3Identifying multi-resolution clusters of diseases in ten million patients with multimorbidity in primary care in England2024 · 16 citations
  4. 4Primary healthcare utilisation among individuals with multimorbidity in deprived communities; a modelling study2026
  5. 5Trajectories in long-term condition accumulation and mortality in older adults: a group-based trajectory modelling approach using the English Longitudinal Study of Ageing2024 · 4 citations