Genome assembly reveals protein-coding genes and microbial diversity in Lyscopodina hypogea, suggesting ecological roles of symbionts.
<ns3:p> We present a genome assembly from an individual <ns3:italic>Lycopodina hypogea</ns3:italic> (carnivorous sponge; Porifera; Demospongiae; Poecilosclerida; Cladorhizidae). The genome sequence has a total length of 235.10 megabases. Most of the assembly (98.85%) is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 31.1 kilobases. Gene annotation of this assembly by Ensembl identified 16 317 protein-coding genes. From the metagenome data we recovered 39 bins, of which 27 were high-quality MAGs, including four fully circularised genomes. The MAGs included archaea and bacteria involved in nitrification and sulfate-reduction as well as known sponge symbionts affiliated with Gammaproteobacteria ( <ns3:italic>Candidatus</ns3:italic> Spongiihabitans, Porisulfidus) and Acidimicrobiales ( <ns3:italic>Candidatus</ns3:italic> Poriferisodalaceae), among others. </ns3:p>
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