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The spleen harbors distinct macrophage subsets that support circulatory homeostasis and initiate immune responses, but the ontogeny and long-term dynamics of these populations remain incompletely understood. Here, we identified a transcriptionally and developmentally distinct CD163-expressing red pulp macrophage (CD163 high RPM) population that arose from yolk sac progenitors and occupied a vascular-associated niche. Using fate-mapping models, we showed that CD163 − RPMs were progressively replenished by monocytes during aging, whereas CD163 high RPMs were mainly self-maintaining. During blood-stage malaria, CD163 high RPMs were rapidly depleted, failed to recover despite parasite clearance, and were replaced by CD163 − monocyte-derived RPMs. Single-cell RNA sequencing and genetic mouse models revealed that CD163 deficiency exacerbated structural disintegration of the marginal zone and selectively impaired marginal metallophilic macrophage (MMM) recovery, underscoring a CD163-dependent RPM-MMM crosstalk. This study reveals that the sustained loss of a specialized, yolk sac-derived CD163 high RPM subset rewires splenic architecture and inter-macrophage crosstalk long after malaria resolution.
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Mauel et al. (2026) studied this question.
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