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December 23, 2007Nucleic Acids ResearchOpen Access

The Mouse Genome Database (MGD): mouse biology and model systems

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Authors

CBCarol J. BultJackson LaboratoryJEJanan T. EppigJackson LaboratoryJKJames A. KadinCentre National de la Recherche Scientifique

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Implication

Database report demonstrates integrated genomic and phenotypic curation in laboratory mice, highlighting enhanced translational research and comparative functional analysis.

Key Points

  • To describe the Mouse Genome Database (MGD) and its role in integrating genetic, genomic, and phenotypic data for the laboratory mouse as a model of human biology and disease.
  • Curated data from biomedical literature, individual investigator laboratories, and major public repositories including Ensembl, UniProt, and NCBI.
  • Standardized data representation using controlled vocabularies and semantic frameworks, including the Gene Ontology (GO) and the Mammalian Phenotype (MP) Ontology.
  • Developed web-based querying tools and direct computational access pipelines for comparative functional and genomic exploration.
  • Integrated standardized gene, sequence, variant, and phenotype information to enable translational hypothesis generation across mammalian species.
  • Incorporated gene trap sequence data linked directly to mouse gene records.
  • Deployed a customized batch query capability to improve data extraction and high-throughput computational retrieval.

Cite This Study

Bult et al. (2007) studied this question.

synapsesocial.com/papers/6a7e025330df0be8fb5ca32fhttps://doi.org/10.1093/nar/gkm961
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