Genome Sequences of Rare Human Enterovirus Genotypes Recovered from Clinical Respiratory Samples in Bern, Switzerland

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  FIG 1. (A) Phylogenetic tree of the EV-D68 genome sequence (EVCG-06-BE) from Bern, Switzerland, with all available EV-D68 genome sequences. The inset on the right indicates phylogenetic relationships in the close neighborhood of the reported EV-D68 sequence (bootstrap support cutoff, ≥70%). Labels consist of isolate's country of origin, accession number, followed by year of isolation separated by vertical bars. Labels of other Swiss EV-D68 genomes retrieved from GenBank (MN245406 to MN245411) are colored in dark green in the circular phylogenetic tree. (B) VP1-based neighbor-joining phylogenetic tree of EV-C105 sequences. The two strains found in Bern, Switzerland (blue circles), were compared with all available EV-C105 sequences in GenBank on the basis of their partial VP1 sequences. Poliovirus 1 was added as an outgroup. Labels consist of sequence accession number, isolate's country of origin, followed by year of isolation separated by spaces. The scale bars represent the number of base substitutions per site. Bootstrap values were set to 1,000 replicates for both phylogenies. Phylogenetic trees were created using MEGA X (23) and further edited using the iTOL platform…