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April 26, 2026STAR ProtocolsOpen Access

Protocol for clonal isolation of gene-edited hiPSCs using droplet and microfluidic sorting

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Authors

HSHemanta SarmahGIGrazia IannelloColumbia University Irving Medical CenterRWRyan WantrobaColumbia University Irving Medical Center

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Implication

Randomized trial demonstrates a new protocol for generating clonal hiPSC lines via gene editing, highlighting its effectiveness for various applications.

Key Points

  • The aim is to establish a reliable protocol for generating clonal lines of gene-edited hiPSCs efficiently.
  • Cultured hiPSCs and performed CRISPR-RNP electroporation.
  • Single-cell sorting was conducted using electrostatic droplet or microfluidics platforms.
  • Clonal lines were expanded and characterized post-sorting.
  • Successfully generated over 100 clonal lines from seven knock-in/knock-out experiments.
  • Demonstrated broad utility and reproducibility of the sorting protocol.
  • Efficiencies of single-cell sorting compared between droplet and microfluidics-based methods.

Cite This Study

Sarmah et al. (2026) studied this question.

synapsesocial.com/papers/69edac4f4a46254e215b4199https://doi.org/10.1016/j.xpro.2026.104518
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